magdzia's starred repositories

vessap

Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning

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SimpleITK-Notebooks

Jupyter notebooks for learning how to use SimpleITK

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SimpleITK

SimpleITK: a simplified layer build on top of the Insight Toolkit (ITK), intended to facilitate its use in rapid prototyping, education and interpreted languages.

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ITK

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

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chicken

a global optimization example + landmark distances

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slurm

Slurm: A Highly Scalable Workload Manager

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munge

MUNGE (MUNGE Uid 'N' Gid Emporium) is an authentication service for creating and validating user credentials.

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ANTs

Advanced Normalization Tools (ANTs)

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ANTsPy

A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.

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