woook's repositories
ACGS_GeL_API_workshop
Repository of code for use in the ACGS-Gel Workshop
automate_demultiplex
a script to automate demultiplexing on the workstation attached to the nextseq
bcbio_validation_workflows
A community menagarie of automated variant validations using bcbio and the Common Workflow Language
CVE-2021-44228_scanner
Scanners for Jar files that may be vulnerable to CVE-2021-44228
FLT3_ITD_ext
FLT3-ITD script based on in-silico extension and clustering
GATK-CaseStudy
GATK Variant Calling Workflow using Galaxy, CWL and Cpipe
gene_lists
List of gene lists for genomic analyses.
genome-data-integration
Methods to integrate data from multiple genome sequencing datasets and form consensus variant calls
giab_announcement_blog
This repository contains recent announcement or blog post from the Genome in a Bottle Consortium
MindTouch_Core
A fork of MindTouch Core from https://sourceforge.net/projects/dekiwiki/
oncokb-annotator
Annotates variants in MAF with OncoKB annotation.
QC3
QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.
synthwave-vscode
Synthwave inspired colour theme for VS Code 🌅🕶