wisstock's repositories
trans_scripts
Scripts for analyzing translocations of fluorescenet-labeled proteins.
domb-tools
DoMB Tools: Python toolkit of Department of Molecular Biophysics
domb-napari
napari plugin for analyzing fluorescence-labeled proteins redistribution
UBDS3_image
Bio Data Science ^3 Summer School. Microscopic images analysis course materials.
CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
ch_calc
Channels crosstalk calculator for multiple fluorophore confocal imaging
B-FRET
Extract FRET signals from noisy FRET data using Bayesian statistical inference
BDS3_2024_img_analysis
Biological Data Science Summer School 20204. Materials for a practical course on live-cell imaging data analysis and creation of plugins for napari.
hipocount-napari
Quantitative analysis of immunofluorescence images of hippocampal slices
iris-hep.github.io-source
Institute for Research and Innovation in Software for High Energy Physics
LeroSphere
Cell detection on phase contrast images
LTD_loc
Analysis of HPCA translocation during LTD induction in CA1 neurons culture
num-methods-for-PDEs
Lecture material on numerical methods for partial differential equations.
OtIFf
OIF - tiff converter
SimplyFire
customizable electrophysiology analysis software
StoF
DIY arduino-base F-stop timer for optical printing
z-dec
Scripts for confocal z-stack image deconvolution