Code for running the analysis in Ke et al., "Efficient Representations of Tumor Diversity with Paired DNA-RNA Anomalies". [https://www.biorxiv.org/content/10.1101/2020.04.24.060129v4] using the lpCover package.
The main script run_all.R will launch other scripts for running various parts of the analysis.
For any questions, please contact one of the maintainers:
Wikum Dinalankara <wdd4001 at med.cornell.edu>
Qian Ke <qke1 at jhu.edu>
Luigi Marchionni <lum4003 at med.cornell.edu>