Pendulum Therapeutics's repositories
NCT03893422
Data-sharing repository for Randomized Clinical Trial NCT03893422 conducted by Pendulum Therapeutics.
Couchbase-Lite-PhoneGap-Plugin
Plugin to install Couchbase Lite in your PhoneGap app on iOS or Android
gphmm
Generalized Pair Hidden Markov Chain Model (GPHMM)
MetaPathways_Python_Koonkie.3.0
MetaPathways is a meta'omic analysis pipeline for the annotation and analysis for environmental sequence information. MetaPathways is a modular annotation and analysis pipeline that uses a user-friendly graphical user interface and knowledge engine data structure to predict metabolic interaction networks from environmental sequence information. Currently, MetaPathways supports genomic read quality control, open reading frame (ORF) prediction, ORF annotation, and environmental pathway-genomes database (ePGDB) construction compatible with the Pathway Tools browser by SRI.
snap
Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data
samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
bowtie2
A fast and sensitive gapped read aligner