wenmm

AdaGCL

[KDD'2023] "AdaGCL: Adaptive Graph Contrastive Learning for Recommendation"

awesome-graph-self-supervised-learning

Code for TKDE paper "Self-supervised learning on graphs: Contrastive, generative, or predictive"

CCP-GNN

chatbot-ollama

Chatbot Ollama is an open source chat UI for Ollama.

DGP-AMIO

diagonalization

Fast exact diagonalization with Eigen and ARPACK

EMTscore

GCNFrame

This is a python package for genomics study with a GCN framework.

gpt4free

The official gpt4free repository | various collection of powerful language models

Homophily-Enhanced-Self-supervision

Code for TNNLS paper "Homophily-Enhanced Self-supervision for Graph Structure Learning: Insights and Directions"

ICoN

Integration using Co-attention across Biological Networks

LINGER

lncRNA-disease-methods

manuscript_scRNAseq_lncRNAs

Repository containing all the scripts necessary for generating the results in the manuscript

MAPE-PPI

Code for ICLR 2024 (Spotlight) paper "MAPE-PPI: Towards Effective and Efficient Protein-Protein Interaction Prediction via Microenvironment-Aware Protein Embedding"

negativeExampleSelection

Demonstration of bias in graph machine learning owing to negative example selection

proxy_pool

Python ProxyPool for web spider

pulearn

Positive-unlabeled learning with Python.

pytorch_geometric

Graph Neural Network Library for PyTorch

recommenders

Best Practices on Recommendation Systems

RFA-GNN

Code for TNNLS paper "Beyond Homophily and Homogeneity Assumption: Relation-based Frequency Adaptive Graph Neural Networks"

scanpy

Single-cell analysis in Python. Scales to >1M cells.

scib

Benchmarking analysis of data integration tools

scvi-tools

Deep probabilistic analysis of single-cell omics data

sd-webui-EasyPhoto

📷 EasyPhoto | Your Smart AI Photo Generator.

SingleFile

Web Extension for saving a faithful copy of a complete web page in a single HTML file

Spectral-Graph-Survey

first commit

speos

A positive-unlabeled ensemble learning framework for disease gene prioritization.

SSLRec

[WSDM'2024 Oral] "SSLRec: A Self-Supervised Learning Framework for Recommendation"

transformer-walkthrough

A walkthrough of transformer architecture code