Wenjing Kang's repositories
MapToCleave
The code of MapToCleave analysis.
nextflow-gpseq
Nextflow pipeline for processing of GPSeq data
snap
Stanford Network Analysis Platform (SNAP) is a general purpose network analysis and graph mining library.
start-git-github-fundamentals
github-starter-course created by GitHub Classroom
sphinx_rtd_theme
Sphinx theme for readthedocs.org
MATCHA
multiway chromatin interaction, 3D genome, single-nucleus
just-the-docs
A modern, high customizable, responsive Jekyll theme for documention with built-in search.
so-simple-theme
A simple Jekyll theme for words and pictures.
NGI-RNAseq
Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.
Easy_webshare_on_UPPMAX
Easy websharing of files on UPPMAX
JAR3D
Java-based Alignment of RNA using 3D structure
shogun
The Shogun Machine Learning Toolbox (Source Code)
scikit-learn
scikit-learn: machine learning in Python
GPy
Gaussian processes framework in python
GPmat
Matlab implementations of Gaussian processes and other machine learning tools.
pmtk3
Probabilistic Modeling Toolkit for Matlab/Octave.
TeachingDemos
Bioinformatics related demos and tutorials using the R programming language
scilifelab
Misc code snippets for Science For Life Laboratory
StringKernelSVM
Implementation of string kernel approach for SVM
ASE
The methods