Weixuan Fu's repositories
bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
bfx-tools-wdl
WDL tasks for commonly used BFX tools
mnp_training
DNA methylation-based classification of central nervous system tumours
penn-ml-benchmarks
A large, curated repository of benchmarks for evaluating supervised machine learning algorithms.
plasmodium-falciparum
Malaria DREAM sub-challenge 2 write-up
psb-manuscript
Manuscript source for the People of the Pacific Symposium on Biocomputing
pVAC-Seq
This tools has been superseded by https://github.com/griffithlab/pVACtools
ReBATE
Relief Based Algorithms of ReBATE implemented in Python with Cython optimization.
scikit-learn
scikit-learn: machine learning in Python
scikit-mdr
A sklearn-compatible Python implementation of Multifactor Dimensionality Reduction (MDR) for feature construction.
scikit-rebate
A scikit-learn-compatible Python implementation of ReBATE, a suite of Relief-based feature selection algorithms for Machine Learning.
spark-sklearn
Scikit-learn integration package for Spark
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
stanford-cs-229-machine-learning
VIP cheatsheets for Stanford's CS 229 Machine Learning
tensorflow
Computation using data flow graphs for scalable machine learning
tpot-ds-ms
Manuscript for tpot-ds