This repository contains a number of different models implemented in ABCpy, broadly classified following different scientific areas:
- BiologicalScience: This folder contains the models from biological science (e.g., Platelets deposition-aggregession model))
- EcologicalScience: This folder contains some ODE models from ecological science (e.g., Ricker, Lotka-Volterra and Earthworms (using netlogo) models); see in the folder for more details
- Climate: This folder contains the models from climate science (e.g., Lorenz 95 model of weather prediction)
- MolecularDynamics: This folder contains the models from Molecular Dynamics (e.g., TIP4P force-field of water and LJ potential of helium)
- Network: This folder contains models from Network science (e.g., Various spreading processes on networks or mehcanistic models of network generation)
- TransportDynamics This folder contains models for Transport Dynamics (e.g., Floor field of pedestrians' walking through corner)
- QueueingSystems This folder contains the M/G/1 queueing model which is used frequently for benchmarking ABC algorithms (see README in that folder for more information)
- Other: Some other models (e.g., multivariate g-and-k model, timeseries and iid models for which the likelihood is known)
These official models are a collection of example models that use ABCpy's high-level APIs. They are intended to be well-maintained, tested, and kept up to date with the latest stable ABCpy API. We especially recommend newer ABCpy users to start here.