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Quan Wei's starred repositories

NextDenovo

Fast and accurate de novo assembler for long reads

Language:CGPL-3.034200

gaftools

General purpose utility related to GAF files

Language:PythonMIT700

Genome-Assembly-Programming-Challenge

Genome Assembly, de Bruijn Graph, Overlap Graph, Bubbles and Tips Removal, Optimal K-mer, Phi X174 Genome, Error-Prone Reads, Universal Circular String, Eulerian Cycle.

2100

strobemers

A repository for generating strobemers and evalaution

Language:C++7100

strobealign

Aligns short reads using dynamic seed size with strobemers

Language:C++MIT12500

giab_data_indexes

This repository contains data indexes from NIST's Genome in a Bottle project.

Language:Roff22700

astarix

AStarix: Fast and Optimal Sequence-to-Graph Aligner

Language:C++MPL-2.07200

sourmash

Quickly search, compare, and analyze genomic and metagenomic data sets.

Language:PythonNOASSERTION44100

genome-sketching

online notebooks for a review of genome sketching

Language:Jupyter NotebookMIT5800

CHM13

The complete sequence of a human genome

NOASSERTION87100

prml

Repository of notes, code and notebooks in Python for the book Pattern Recognition and Machine Learning by Christopher Bishop

Language:Jupyter NotebookAGPL-3.0194400

simde

Implementations of SIMD instruction sets for systems which don't natively support them.

Language:CMIT221100

SGA

Prototype implementation of sequence to graph alignment algorithms

Language:C++GPL-3.0200

Chinese-Pangenome-Consortium-Phase-I

Language:Shell6000

ChatALL

Concurrently chat with ChatGPT, Bing Chat, Bard, Alpaca, Vicuna, Claude, ChatGLM, MOSS, 讯飞星火, 文心一言 and more, discover the best answers

Language:JavaScriptApache-2.01444800

arm-workshop-rsc2019

Materials for the rstudio::conf 2019 Advanced R Markdown workshop

Language:HTMLCC-BY-SA-4.011500

CPANG22

Computational Pangenomics

Language:RubyNOASSERTION1500

aacbb-workshop.github.io

Workshop on Accelerators for Computational Biology and Bioinformatics

Language:HTMLMIT100

slides

Slides for presentations and workshops

Language:HTML500

stats-illustrations

R & stats illustrations by @allison_horst

CC-BY-4.0180200

为GPT/GLM等LLM大语言模型提供实用化交互接口，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持chatglm3等本地模型。接入通义千问, deepseekcoder, 讯飞星火, 文心一言, llama2, rwkv, claude2, moss等。

Language:PythonGPL-3.05974000

awesome-chatgpt-prompts

This repo includes ChatGPT prompt curation to use ChatGPT better.

Language:HTMLCC0-1.010549000

easytrader

提供同花顺客户端/国金/华泰客户端/雪球的基金、股票自动程序化交易以及自动打新，支持跟踪 joinquant /ricequant 模拟交易和实盘雪球组合, 量化交易组件

Language:PythonMIT772300

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