web4bio / webgen

WebGen Vertically Integrated Project

Home Page:https://web4bio.github.io/webgen/main/html/

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Only one page of mutation data is ever returned

rmoffitt opened this issue · comments

page_size: 250,

It appears that only one page of 250 results is requested. The firebrowse.fetchMutationMAF function needs updating to do something similar to the mRNAseq request, i.e.

const groupBy = [];
if (genes) {
params.gene = genes;
groupBy.push({key: "gene", length: 20});
}
if (barcodes) {
params.tcga_participant_barcode = barcodes;
groupBy.push({key: "tcga_participant_barcode", length: 50});
}

Issue was resolved when Pull Request #386 was merged