wbazant

CORRAL

silva-for-dada2

Format the SILVA LSU dataset for DADA2's assignTaxonomy and addSpecies

marker_alignments

process and summarise alignments of metagenomic sequencing reads to reference databases of marker genes

ApiCommonMetadataRepository

Git mirror of the ApiCommonMetadataRepository svn project. Commits here will be lost.

ApiCommonWebsite

argdown

argparse to Markdown for your README.md!

dada2

Accurate sample inference from amplicon data with single nucleotide resolution

dataset-handler-biom

demos

didactic-funicular

dots-patterns

Patterns for decentralized protocols and applications.

EbrcWebsiteCommon

EukDetect

falling-fruit-web

Mobile-friendly website for Falling Fruit

humann

HUMAnN 3.0 is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).

markerAlignmentsPaper

monday

Python client for Monday.com

mpmp-plasmodb

Demo on integrating MPMP within PlasmoDB

nextflow-extmodules-example

Example for using an external submodule in Nextflow with DSL2

nextflow-hello-dsl2

Hello world in DSL2 Nextflow

OpenAPI-Specification

The OpenAPI Specification Repository

pomidor

The application for playing the game of pomidor

ShortRead

sra-traces-results

Download taxon abundances from the SRA Taxonomic Analysis Tool (STAT) for each run in a metagenomic study

TADA

TADA - Targeted Amplicon Diversity Analysis - a DADA2-focused Nextflow workflow for any targeted amplicon region

usefulpatches

Useful Patches public site

wbazant.github.io

wdk-mockups

WDKClient

Yancy

A tiny CMS / REST API using Mojolicious