wayoffthecoast's repositories
apollo-server-lambda-nodejs
Source code for blog post "How to build and deploy GraphQL Server in AWS Lambda with Nodejs and Cloudformation"
aq-graphics
Aquarium SVG Graphics Library: An Aquarium Library
Aquarium-High-Throughput-Culturing
Aquarium High Throughput Culturing: An Aquarium Workflow
aquarium-multiple-deployment
Configuration for running multiple Aquaria
awesome-deep-learning-papers
The most cited deep learning papers
cello
Genetic circuit design automation
aws-appsync-refarch-microservices
AWS AppSync Microservices Access Layer Reference Architecture
benchling-api
A python wrapper for the benchling api
cdk-graphql-lambda-example
A CDK Stack that creates a simple GraphQL + Apollo Server + AWS Lambda backend
claritylims
Customizations for our GenoLogics BaseSpace Clarity LIMS
DNA-scanner
Online tool for comparing prices and feasibility of DNA synthesis
DropSynth
Scripts to design DropSynth oligos
eVOLVERCLI
A Command-Line Interface for the eVOLVER Continuous Culture Framework
geneioustraining
Introductory notes on using Geneious (Biomatters) at NIAID
genetic-constructor-ce
Genetic Constructor
Jellyfish
Scripts for accessing information about Aquarium High Throughput Culturing operation types through Trident API.
masif
MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.
ngs-review
Protocols for NGS
prospr
ProSPr: Protein Structure Prediction
pydna-examples
Jupyter notebooks and data files that demonstrates how pydna can be used to simulate and document cloning
repp
Repository-based plasmid design
ScaffoldSeq
ScaffoldSeq - Software for characterization of directed evolution populations
scalable_analytics
Self-help guides for scalable data analytics
serverless-cognito-auth
This serverless application provides a AWS Cognito user pool
slurm-for-ml
A Machine Learning workflow for Slurm.
Web_tools_docs
LIMS Documentation
ypk-xylose-pathways
Pereira, F., Azevedo, F., Parachin, N. S., Hahn-Hägerdal, B., Gorwa-Grauslund, M. F., & Johansson, B. (2016). Yeast Pathway Kit: A Method for Metabolic Pathway Assembly with Automatically Simulated Executable Documentation. ACS Synthetic Biology, 5(5), 386–394.