Ware Lab

gramene-genetree-vis

React client-side vis for Compara gene tree

gramene-curation

Web application for gene curation.

gramene-ensembl

Gramene's Ensembl plugins, extensions, configuration.

NECorr

gramene-mongodb

Gramene's MongoDB. ETL code

gramene-swagger

Gramene web service interface, powered by swagger

release-notes

fastaIdx

redis backed api that mimics ensembl rest :species/sequence/region/:location (JSON only)

gramene-alerts

gramene-bins-client

Provide convenient API for working with gene distribution bins provided by data.gramene.org/genes

gramene-dbxrefs

module for linking to external databases

gramene-ebeye

REST endpoint to furnish the Gramene ensembl site with search results

gramene-efp-browser

gramene-mdview

gramene-mongodb-config

gramene-search

gramene-search-client

Javascript client for searching Gramene's API

gramene-search-scripts

gramene-search-vis

Visualizations used in gramene-search

gramene-sites

Front end of gramene main and subsites

gramene-solr

gramene-taxonomy-with-genomes

Integrate gramene-trees-client taxonomy with gramene-bins-client

gramene-trees-client

gramoogle

Gramene Search Interface

mdView

react component to view markdown files from github

SbiCLIM

sorghum-search

sorghum-webapp

Code for the sorghumbase.org web site.

tbrowse

gene tree React component

wordpress_orm

A Python wrapper around the WordPress JSON API.