CWCWW's repositories
asynt
Genome alignment and synteny plots
awesome-genome-visualization
A list of interesting genome browser or genome-browser-like implementations
Chromosome_evolution_Lepidoptera_MS
Scripts associated with 'Chromosome Evolution in Lepidoptera' manuscript
CN1
The complete sequence of a Chinese individual
cnidariangenomes
Code for the Nematostella Vectensis and Scolanthus Calimorphus genome assembly and analysis
discrepant_region
visualization of the 238 large discrepent regions between CHM13 and GRCh38
duck_comp_gen
Comparative genomics of obligate brood parasite and closely related species in Anatidae
Fin_whale_Population_Genomics
This reposiroy contains all scripts used to perform the analysis described in the research paper Nigenda-Morales and Lin etal. 2021
FormicidaeMolecularEvolution
Scripts and how-tos for comparative genomics work.
gBGC-drives-accelerated-evolution-of-UCEs
Scripts and piplines for the UCE identification and other analyses.
GitHubDaily
坚持分享 GitHub 上高质量、有趣实用的开源技术教程、开发者工具、编程网站、技术资讯。A list cool, interesting projects of GitHub.
Great-apes-specific-SVs
To study the great apes specific structure variation
IntronOrNot
Ensembl GSoC 2023 Project Mirror - Differentiating Real and Misaligned Introns with Machine Learning
Leptidea_chromosome_research2022
Scripts used for analyzing chromosome rearrangements in Leptidea butterflies
popgen-notes
Population genetics notes
RatesOfAdaptation
Estimating the rates of adaptive evolution in fungal species using whole-genome sequences
snpArcher
Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
TE-workflows
Snakemake workflows for analyzing and visualizing transposable elements
Vargas-Chavez_et_al_2024_Chromosome_shattering_clitellate_origins
Repository for code and files related to the manuscript Vargas-Chávez et al. 2024. A punctuated burst of massive genomic rearrangements by chromosome shattering and the origin of non-marine annelids
Vertebrate_Chemoreceptors_mining
Full automatic pipelines to mine OR, TAAR, V2R and V1R genes from any vertebrate genome