wakanapo / MPI_VBQ_Optimizer

MPI_VBQ_Optimizer

How to install

1. install protocol buffers, openmpi

$ apt install -y protobuf-compiler openmpi-bin libopenmpi-dev

2. install requirements by pip

$ pip install scipy keras tensorflow pillow tqdm

3. install gRPC Please follow instructions: C++, Python

4. build

$ make -j20

5. create initial set of genoms

$ mkdir data
$ python src/util/make_first_generation.py 8 50 p8g50 random 

6. run mock

$ mpirun -n 2 ./bin/mpi p8g50 vgg_like -1 --max_generation=1 --is_mock=true