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Wählby Lab (wahlby-lab)

Wählby Lab

wahlby-lab

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Quantitative Microscopy group with focus on developing digital image analysis and deep learning methods and tools for applications in life science.

Location:Uppsala University

Home Page:http://user.it.uu.se/~cli05194/index.html

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Wählby Lab's repositories

spage2vec

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:14Issues:5Issues:2

graph-iss

Graph-based Decoding for In Situ Sequencing

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:10Issues:4Issues:1

ML-celltype-neighbor

Our workflow for our paper "“Machine learningfor cell classification and neighborhood analysis in glioma tissue"

Language:PythonLicense:GPL-3.0Stargazers:3Issues:0Issues:0

Points2Regions

Simple tool for clustering spatial points with categorical labels.

Language:Jupyter NotebookLicense:MITStargazers:3Issues:0Issues:0

TMA-studies

Language:JavaScriptLicense:GPL-3.0Stargazers:2Issues:3Issues:0

InSilicoTFM

🧫 Framework for predicting cellular traction forces with Deep Learning. 🤖

Language:Jupyter NotebookLicense:MITStargazers:1Issues:3Issues:0

is3g

In Situ Sequencing Segmentation

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:1Issues:0Issues:0

ISS_Decoding_colab

In Situ Sequencing decoding compatible with Google Colab

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:1Issues:0Issues:0

napari-points2regions

A napari plugin for Points2Regions

Language:PythonLicense:MITStargazers:0Issues:0Issues:0

spage2vec_heart

spage2vec, developmental human heart, in situ sequensing

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:0Issues:0Issues:0

analytical-enrichment-test

Analytical neighborhood enrichment test

Language:Jupyter NotebookLicense:MITStargazers:0Issues:0Issues:0