Dinghua Li's repositories

megahit

Ultra-fast and memory-efficient (meta-)genome assembler

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kxsort

Fast in-place radix sort with STL-like API

miniasm

Ultrafast de novo assembly for long noisy reads (though having no consensus step)

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resume

Software developer resume in Latex

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Autoware

Open-source software for urban autonomous driving

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bwa

Burrow-Wheeler Aligner for pairwise alignment between DNA sequences

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flat_hash_map

A very fast hashtable

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GenomicConsensus

PacBio® variant and consensus caller (Quiver algorithm)

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minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

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smartdenovo

Ultra-fast de novo assembler using long noisy reads

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SOAP3-dp

To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be configured to favor speed in trade of accuracy and sensitivity. SOAP3-dp, through leveraging the computational power of both CPU and GPU with optimized algorithms, delivers high speed and sensitivity simultaneously.

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sparsepp

A fast, memory efficient hash map for C++

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apollo

An open autonomous driving platform

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fermi-lite

Standalone C library for assembling Illumina short reads in small regions

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filterpy

Python Kalman filtering and optimal estimation library. Implements Kalman filter, particle filter, Extended Kalman filter, Unscented Kalman filter, g-h (alpha-beta), least squares, H Infinity, smoothers, and more. Has companion book 'Kalman and Bayesian Filters in Python'.

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FP-COMP8503

Codes and files for the final project of COMP8503

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gcc-4.9.2-boost-1.57

Bash script to install gcc-4.9.2 and boost-1.57 on CentOS 5.x, CentOS 6.x and Mac OS X. Languages: c++, c and go. Includes tcmalloc on linux.

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kubernetes

Production-Grade Container Scheduling and Management

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mxnet

Lightweight, Portable, Flexible Distributed/Mobile Deep Learning with Dynamic, Mutation-aware Dataflow Dep Scheduler; for Python, R, Julia, Scala, Go, Javascript and more

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osqp

The Operator Splitting QP Solver

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pavian

Interactive analysis of metagenomics data

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ros_comm

ROS communications-related packages, including core client libraries (roscpp, rospy, roslisp) and graph introspection tools (rostopic, rosnode, rosservice, rosparam).

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sfb

Flappy Bird clone, written in GNU sed

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sparsehash-c11

Experimental C++11 version of sparsehash

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xxHash

Extremely fast non-cryptographic hash algorithm

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zh-google-styleguide

Google 开源项目风格指南 (中文版)

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