vjd / ggXpose

ggXpose

Description

Ports of Xpose4 lattice functions to ggplot2.

Usage

The goal is to allow the user to use the same code used for creating plots as for lattice-Xpose, although some additional arguments may sometimes be required:

library(xpose4)
source("kaplan.plot.R") # update plot definition

xpose4()  # read in Xpose tables
kaplan.plot(xpdb)  
kaplan.plot(xpdb, by=c("ARM==0","ARM==1","ARM==2","ARM==3"), xlim=c(0,120), facet="wrap")  

Status

• kaplan.plot(): basic version implemented, allows stratification. VPC for KM-plot not tested yet.
• xpose.VPC(): basic version implemented, allows stratification.

Planned

• xpose.plot.default(): if implemented, most Xpose plots should be covered
• xpose.panel.default(): Panel functionality should be moved to xpose.plot.default()
• xpose.plot.histogram(): Histogram plots
• xpose.panel.histogram(): Panel functionality should be moved to xpose.plot.histogram()
• xpose.plot.bw(): bw plots
• xpose.panel.bw(): Panel functionality should be moved to xpose.plot.bw()
• xpose.plot.qq(): qq plots
• xpose.panel.qq(): Panel functionality should be moved to xpose.plot.qq()
• xpose.plot.splom(): splom plots
• xpose.panel.splom(): Panel functionality should be moved to xpose.plot.splom()
• ind.plots()
• xpose.VPC.categorical(): uses xyplot() directly
• plots in bootgam.plots.R
• data.checkout()
• dOFV.vs.id(): uses xyplot() directly
• npc.coverage(): uses xyplot() directly
• xp.akaike.plot(): uses dotplot() directly
• xp.plot(): uses lattice plots directly
• Any other GAM plots
• All other plots from xpose4specific will hopefully work unchanged once the above are translated
• ...