vivian457

DVA

Computational methods for drug re-positioning identify potential anti-virals treatments against COVID-19

FootprintMethods_on_scRNAseq

In this repository we explore to which extend bulk and single-cell based functional genomics tools work on single cell RNA-seq data

tensorflow-windows-wheel

Tensorflow prebuilt binary for Windows

0425_FKLGCN_Results

awosome-bioinformatics

A curated list of resources for learning bioinformatics.

bgnn

BioNEV

Code and datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations"

CGATCPred

COVID-19_drug_virus_association

decagon

Graph convolutional neural network for multirelational link prediction

Deep-Learning-with-TensorFlow-book

深度学习开源书，基于TensorFlow 2.0实战。Open source Deep Learning book, based on TensorFlow 2.0 framework.

dgl

Python package built to ease deep learning on graph, on top of existing DL frameworks.

DTINet

A Network Integration Approach for Drug-Target Interaction Prediction

GNNPapers

Must-read papers on graph neural networks (GNN)

hnuthesis

湖南大学硕士学位论文 LaTeX 模板

HumanDiseaseOntology

Repository for the Human Disease Ontology.

lncRNA-protein-interactions-prediction

Predicting lncRNA-protein interactions with miRNAs as mediators in a heterogeneous network model

lncRNA_Mdeep

lrg-code

Repository containing the scripts and API to generate and store the LRGs

mklaren

A Python Multiple kernel learning library.

MONET

MONET : MOdularising NEtwork Toolbox - doi: https://doi.org/10.1101/611418

Music-Recommendation-System

KKBox's Music Recommendation Challenge on Kaggle.

nimfa

Nimfa: Nonnegative matrix factorization in Python

OpenNE

An Open-Source Package for Network Embedding (NE)

pytorch-a2c-ppo-acktr-gail

PyTorch implementation of Advantage Actor Critic (A2C), Proximal Policy Optimization (PPO), Scalable trust-region method for deep reinforcement learning using Kronecker-factored approximation (ACKTR) and Generative Adversarial Imitation Learning (GAIL).

scanpy

Single-Cell Analysis in Python. Scales to >1M cells.

scikit-learn

scikit-learn: machine learning in Python

SMALF

Tri-HM-RWR

miRNA-disease association prediction on a tripartite heterogeneous multiplex network

TSCAN

TSCAN: Tools for Single-Cell ANalysis