vinisalazar / corgi

Classifier for ORGanelles (Inter alia)

Installation

The software can be installed using pip

pip install bio-corgi

To install the latest version from the repository, you can use this command:

pip install git+https://github.com/rbturnbull/corgi.git

Usage

To make predictions, run the corgi command line tool:

corgi --fasta <input fasta file> --output-csv <results>

For more information about the other options, see the help with:

corgi --help

For help on training a model with corgi, run:

corgi-train --help

Credits

• Robert Turnbull <[e-mail]>
• Created using torchapp (https://github.com/rbturnbull/torchapp)