Goodwin Model Experiments
Source Code Organization
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All top level files have the _main.m name scheme.
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To start out the main.m shows the basic functionalities of the model implementation of the Goodwin Model [2] such as a single oscillating cell and successful synchronization of the model run with 10 cells.
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fig1a_main.m shows code for the replication of figure 1a from [1] with the Goodwin 3-state model using mean field coupling and a library of predefined parameter sets.
Sources:
[1] “The effects of non-self-sustained oscillators on the entrainment ability of the suprachiasmatic nucleus”; Gu, Tang, Rohling & Yang; Nature Scientific Reports; 2016
[2] “Spontaneous Synchronization of Coupled Circadian Oscillators”; Gonze, Bernard, Waltermann, Kramer, Herzel; BioPhysics J; 2005