vdancik

vdancik

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Company:Broad Institute

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vdancik's starred repositories

openapi-generator

OpenAPI Generator allows generation of API client libraries (SDK generation), server stubs, documentation and configuration automatically given an OpenAPI Spec (v2, v3)

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biolink-model

Schema and generated objects for biolink data model and upper ontology

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ReasonerAPI

NCATS Biomedical Translator Reasoners Standard API

RTX

Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

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translator-api-registry

This repo hosts the API metadata for the Translator project

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smartAPI-Specification

The OpenAPI Specification Repository

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data2services-pipeline

⚠️ DEPRECATED. See http://d2s.semanticscience.org

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tranql

A Translator Query Language

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depmap-api

API access for DepMap data

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Feedback

A repo for tracking gaps in Translator data and finding ways to fill them.

cq-notebooks

Notebooks for answering competency questions

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translator-testing-framework

A testing framework for Translator using tests written in Behave

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nci-ctd2-dashboard-tmpl-helper

NCI CTD^2 Dashboard Template Helper

biothingsprovenancemodel

A proposed specification for how to capture available provenance information for chemical assertions integrated by the BioThings API suite

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semmed-biolink

normalization of sememd db to biolink model

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broad-translator

Component of the Broad-based gray team to the NCATS Biomedical translator

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sharpener

Gene-sharpener API

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gene_knockout_correlation

API access to gene knockout correlations based on Cancer Dependency Map (DepMap) data

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sharpener-tcrd-filter

REST API to adapt our TCRD API to the Gene Sharpener API

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fragments

NMR fragment screening

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HMDB-knowledge-beacon

Knowledge beacon for the Human Metabolome Database

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