van Dijk Lab

cell2sentence-ft

Cell2Sentence turns scRNA-seq data into text for LLM training.

BrainLM

CINEMA-OT

CST

Continuous Spatiotemporal Transformer

scGAT

Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attention Networks" to appear in ACM Proceedings. <https://arxiv.org/abs/2002.07128>

HBEC_SARS-CoV-2_scRNA-seq

Supplementary data for "Single-cell longitudinal analysis of SARS-CoV-2 infection in human bronchial epithelial cells"

single-cell_neurodegeneration

Code for Tejwani L* & Ravindra NG* et al. 2020

CPSC482

encoding_wasserstein_metrics

Using set encoders to encode Wasserstein Spaces

self-supervsed_edge_feats

code for "Self-supervised edge features for improved Graph Neural Network training", <arxivlink>