ValterAlmeida

Valter Almeida's starred repositories

Bracken

Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.

Language:C++GPL-3.027600

mOTUs

motus - a tool for marker gene-based OTU (mOTU) profiling

Language:PythonGPL-3.014300

biobakery_workflows

bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validated tools and parameters.

Language:PythonNOASSERTION9400

phylophlan

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes

Language:PythonMIT11800

Maaslin2

MaAsLin2: Microbiome Multivariate Association with Linear Models

Language:RNOASSERTION11100