urakubo

UNI-EM

A unified environment for DNN-based automated segmentation of neuronal EM images

Dojo-standalone

A standalone version of Dojo from Rhoana pipeline

analyses_pips

Communication between Pandey and Urakubo

ffn_windows

Windows10, 64bit版 ffn および Example dataset

Filled_ECS_Mesh

GenerateTetrahedraMesh

STEPS simulation from FIB/SEM images

Lattice_Microbes

llps

Internal: LLPS of CaMKII system

ModelRP2

The critical balance between dopamine D2 receptor and RGS for the sensitive detection of a transient decay in dopamine signal

UNI-EM_annotator

UNI-EM annotator

imagesegmentation-tensorflow

imagetranslation-tensorflow

Tensorflow implementation of image-to-image translation using generative adversarial networks

LASSI

LASSI - Lattice Simulation Engine For Stickers And Spacer Interactions

lm_extension

Extensions on lattice microbes

ModelRP

Signaling models for dopamine-dependent temporal contiguity in striatal synaptic plasticity

Parajuli

Geometry and the placement of spine synapses along a dendrite

pytorch_connectomics

PyTorch Connectomics: segmentation toolbox for EM connectomics

RhoA-model

RhoA model for internal use

SpineCa_MultiTrials

Simulation of NMDAR-mediated Ca2+ signals on STEPS, Six trials.

tensorflow-windows-wheel

Tensorflow prebuilt binary for Windows

three-annotator