unverciftci

caddy

Fast and extensible multi-platform HTTP/1-2-3 web server with automatic HTTPS

neural-mmo

Code for the paper "Neural MMO: A Massively Multiagent Game Environment for Training and Evaluating Intelligent Agents"

awesome-llm-powered-agent

Awesome things about LLM-powered agents. Papers / Repos / Blogs / ...

DiffDock

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

MolecularNodes

Toolbox for molecular animations in Blender, powered by Geometry Nodes.

openperplex_backend_os

openperplex is an opensource AI search engine

roundtable-js

Open-source research-grade programmatic survey software

awesome-agents

🤖 Awesome list of AI Agents

foldmason

Multiple Protein Structure Alignment at Scale with FoldMason

SynNet

DiffRL

Learning Optimal Policies Through Contact in Differentiable Simulation

visual-pde

Interactive partial differential equation solver, live in your device's web browser

mppi_playground

Model Predictive Path Integral Control (MPPI) with PyTorch

strwythura

How to construct knowledge graphs from unstructured data sources

cheap-proteins

Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. https://www.biorxiv.org/content/10.1101/2024.08.06.606920v1

MaxDiffRL

Pallatom

intelligent-go-explore

Intelligent Go-Explore: Standing on the Shoulders of Giant Foundation Models

A-Review-of-pLMs-and-Methods-for-Protein-Structure-Prediction

raygun

Template-based protein design with Raygun

GraphLanguageModels

Code for our paper "Graph Language Models"

protein-transfer

featuredock

FeatureDock is a protein-ligand docking software guided by physicochemical feature-based local environment learning using Transformer

Compact-Language-Models-via-Pruning-and-Knowledge-Distillation

Unofficial implementation of https://arxiv.org/pdf/2407.14679

MoreRed

Molecular Relaxation with Reverse Diffusion

LatProtRL

[ICML 24] Robust Optimization in Protein Fitness Landscapes Using Reinforcement Learning in Latent Space

DataDrivenLinearization

Constructing linearizing transformations for reduced-order modeling of nonlinear dynamical systems

primp-matlab

[T-RO] MATLAB implementation of PRobabilistically-Informed Motion Primitives (PRIMP), a learning-from-demonstration method on Lie group.

simple-rag-app

Simple RAG App using Ollama and LangChain

Benchmarking-tpLMs