ulelab / peka

Find motifs enriched around prominent crosslinks

ulelab/peka Issues

test data works, but own data gives: ValueError: Overlapping IntervalIndex is not accepted.
Closed 5 months ago3
Working with cross-link sites identified using iCount with overlapping indicies
Closed 3 months ago6
PEKA on intronless genomes
Closed a year ago6
Example input files?
Closed 2 years ago4
Question on how to make use of CLIP-Seq biological replicates?
Closed 2 years ago2
Puzzle about the Figure 1g about Heatmaps showing relative occurrences (RtXn) and PEKA-scores for top 40 k-mers
Closed 2 years ago4
ValueError: Overlapping IntervalIndex is not accepted.
Closed 2 years ago6
Hi, can you provide sample data to see whether it works or not? Very appreciate for that.
Closed 2 years ago1