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ulelab / peka-eclip

Download and prepare ENCODE eCLIP raw fastq for processing with the nf-core/clipseq pipeline

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clipnf-core

peka-eclip

This repository contains scripts to:

  • Download raw ENCODE eCLIP fastq files
  • Pre-process them to ensure they can be run through the nf-core/clipseq pipeline
  • Run them through the nf-core/clipseq pipeline

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Download and prepare ENCODE eCLIP raw fastq for processing with the nf-core/clipseq pipeline

clipnf-core

License:GNU General Public License v3.0

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