Utz Ermel's repositories
artiatomi-tools
Tools based on the Artiatomi cryo-ET package.
chimerax-ome-zarr
OME-Zarr support for ChimeraX
mrc2omezarr
Convert MRC files to OME-Zarr files.
Language:MATLABGPL-3.0000
Language:C++GPL-3.0000
cAligner
3D alignment of cryo electron tomographic tilt series
Language:C++000
chimerax-remotebrowser
Browse and open images from remote storage locations in ChimeraX.
Language:PythonMIT000
cryohub
IO hub for Cryo-EM, Cryo-ET and subtomogram averaging data.
NOASSERTION000
filesystem_spec
A specification that python filesystems should adhere to.
BSD-3-Clause000
GCtfFind
GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series
BSD-3-Clause000
imodmodel
IMOD model files as pandas dataframes in Python
NOASSERTION000
remotebrain
Run membrain-seg with image files on AWS S3
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VNTI-to-Benchling
A python 3 script to convert VectorNTI type primer archives to a Benchling-importable format. Not affiliated with either Benchling or VectorNTI.
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