ucl-pond / pySuStaIn

Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.

ucl-pond/pySuStaIn Issues

IndexError during CV
Updated a month ago
selecting the best number of subtypes
Updated 2 months ago
selecting the best number of subtypes
Closed 2 months ago
selecting the best number of subtypes
Closed 2 months ago
Mixed Data Types
Updated in 2 hours3
Two questions in ZscoreSustain
Closed 2 months ago4
Two questions in ZscoreSustain
Closed 2 months ago
subtype_and_stage_individuals_newData performance issue
Updated 3 months ago
About some installation error
Closed 3 months ago1
Apply the trained model to external/independent data
Closed 4 months ago2
Enabling PVD Plot Legends
Updated 3 months ago1
ValueError in AbstractSuStaIn
Closed a year ago10
Example code for mixture_KDE
Closed a year ago3
[Question] Can we discover subtypes in a training test, and use the discovered subtypes to subtype subjects of a test set?
Closed 2 years ago1
minor installation issue with sklearn
Closed 2 years ago1
Allow for complete model reloading
Updated 2 years ago2
Parallelization fails -- TypeError: cannot pickle '_abc._abc_data' object
Updated a year ago4
Mislabelled subtype numbers in PVDs
Updated a year ago9
Ordinal Sustain Notebook
Updated a year ago3
Parallel CV doesn't work (aka "Why do all my CV jobs run for fold 0 only???")
Closed 2 years ago1
Question on Using pySuStaIn on ADNI
Closed 3 years ago3
How to interpret the Positional Variance Diagram
Closed 3 years ago1
Data Preparation Pipeline/Code
Closed 3 years ago5
IndexError while running the SuStaIn Workshop file
Closed 3 years ago2
Adding a colourbar to PVD plots
Updated 3 years ago6
Idea: SusStaIn constraint with longitudinal measures
Updated 5 months ago6
Fix for "rare" divide by zero problem
Updated 6 months ago6
`use_parallel_startpoints` fails on numpy 1.21
Updated 3 years ago6
Fixing controls in GMM
Closed 3 years ago2
multiple sclerosis
Closed 3 years ago3
TypeError: 'int' object is not iterable in ZscoreSustain
Closed 3 years ago8
Out of bounds issue in: self._optimise_parameters()
Closed 3 years ago3
Cross validation -- option to control # of threads
Updated 4 years ago5
SuStaIn in pymc3, and Variational Inference?
Closed 3 years ago1
Problem when defining high number of biomarkers
Closed 3 years ago
bug in cross-validation when using "select_fold"
Closed 4 years ago2
Cross-validation for selecting optimal number of clusters
Closed 4 years ago1
Missing data
Closed 4 years ago5