uberon's starred repositories
ontology-access-kit
Ontology Access Kit: A python library and command line application for working with ontologies
schemasheets
Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats
schema-automator
Automated assistance for the schema development lifecycle
linkml-runtime
Runtime support for linkml generated models
ghga-metadata-schema
Metadata schema for the German Human Genome-Phenome Archive (GHGA)
linkml-owl
Extension of LinkML runtime for converting instances of LinkML classes to OWL (classes or instances)
linkml-registry
Registry of schemas that use LinkML
archived-linkml-model-template
DEPRECATED! Please use linkml-project-cookiecutter instead.
linkml-project-template
A template for LinkML projects using poetry and gen-project
json-flattener
Python library for denormalizing nested dicts or json objects to tables and back
sql_compiler
Translates logic program queries to SQL
linkml-phenopackets
EXPERIMENTAL rendering of phenopackets in linkml
wikidata_ontomatcher
Matches ontology classes against wikidata
linkml-dataops
Data API for LinkML instance data
linkml-solr
Simple wrapper for using Solr with LinkML schemas
prologterms-py
a python library for constructing prolog terms
linkml-sparql
Maps LinkML queries to SPARQL and back (ALPHA)
linkml-validator
[retired]
TermCI-model
The Terminology Code Index Entry model
linkml-csv
LinkML to CSV conversion
domestic-animal-diversity
LinkML rendering of FAO domestic-animal-diversity schema EXPERIMENTAL
linkml-prov
LinkML rendering of PROV
linkml-schemaorg
Automated linkml rendering of schema.org
linkml.github.io
Website/splash page for main LinkML project