twlab / TEProf2Paper

TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data

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UnsatisfiableError during conda installation

ChristianRohde opened this issue · comments

Hi, I am using conda version 23.5.0. I downloaded the script TEProf2.yml from github and try to run it as recommended:

conda env create -f TEProf2.yml

Unfortunatly I run into a lot of conflicts and finally UnsatisfiableError. In the end I get the message 'Your installed version is: 2.28' but I cannot activate the enviroment since it has not been created.

Please have a look at the output from conda attached. How can we solve these issues?

Best,
Christian
TEProf2_conda_issue.txt

Hello Christian,

I had used 22.9.0 version to create the .yml, but I am not sure if it will work in the most up-to-date version. I will see if it will work on a clean install of 23.5.0. If not, I may have to make the .yml again.

Best,
Nakul

Hello @ChristianRohde,

Could you please try again using the following YML file: https://wangftp.wustl.edu/~nshah/ucsf/TCGA33Download/TEProf2Paper.yml

Best,
Nakul

Hello @ChristianRohde,

Could you please try again using the following YML file: https://wangftp.wustl.edu/~nshah/ucsf/TCGA33Download/TEProf2Paper.yml

Best, Nakul

yes, this one worked!. Thank you very much