Zhouyunlai's repositories
seurat-disk
Interfaces for HDF5-based Single Cell File Formats
R-Programming
ggplot2 数据分析与图形艺术
2020_Wilk_COVID
Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVID-19"
awesome-vdj
Tools and databases for analyzing HLA and VDJ genes.
cell-name-and-marker-validator
Cell Name and Marker Validation Demo
CellTypePrediction
R script for cell type prediction based on CellMarker database and hypergeometric test
conos
Clustering on Network of Samples
covidregionaldata
Data extraction tools for the Covid-19 outbreak
excelerate-scRNAseq
Single RNA-seq data analysis with R (Finland, May, 2019)
FIt-SNE
Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)
IMGTHLA
Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute
MetaNeighbor-1
A method to rapidly assess cell type identity using both functional and random gene sets
myFig
纯图片用，未经允许不得转载哦。
orange3-single-cell
🍊🔬 Orange add-on for gene expression of single cell data
pagoda2
R package for analyzing and interactively exploring large single-cell RNA-seq datasets
r4ds
R for data science
scPlot
Single cell interactive plotting tools
scRepertoire
A toolkit for single-cell immune profiling
scRNA-tools
Table of software for the analysis of single-cell RNA-seq data.
scRNAseq_Benchmark
Bench-marking classification tools for scRNA-seq data
seurat
R toolkit for single cell genomics
shiny
Easy interactive web applications with R
tidytuesday
Official repo for the #tidytuesday project
tuqiang2014.github.io
周运来就是我 Blog
vdjtools
Post-analysis of immune repertoire sequencing data