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STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data

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R toolkit for single cell genomics

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How to perform GO term enrichment analysis using topGO (Alexa et al., 2006).

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Single-cell RNA-seq clustering and annotation

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An R toolkit for estimation of cell composition from bulk expression data

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Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles

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Doublet detection in single-cell RNA-seq data.

Language:Jupyter NotebookMIT8000

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Detect doublets in single-cell RNA-seq data

Language:Jupyter NotebookMIT11500

scLearn：Learning for single cell assignment

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single cell data metric learning

Language:R600