Tyler S. Laird's repositories
Protocols
A place for various lab protocols
wORm
Instructions for a constructing an apparatus to aid in microbial inoculation experiments of Galleria mellonella (Wax worm)
ODroid600
This repository contains code and instructions for making a low cost automated optical density photometer.
ClusterSearch
A tool to identify gene clusters in Bacterial genomes.
WorkflowBin
Contains various scripts and solutions to enhance workflow
UCDPD_fetch
Fetching, converting, and aggregating police logs from the UC Davis Police Department website.
genoPlotR2
A copy of the CRAN repository genoPlotR with added functionality for labeling genes
StatsBin
A repository for storing scripts and templates for various statistical analysis and data visualization tasks
MCA_HTC
Example scripts for running DADA2 in a HTC environment
BEAST_HTC
For running BEAST on an HTC environment
netlogo_HTC
A sample workflow for running netlogo files in a High Throughput Computing (HTC) environment such as the Open Science Grid (OSG).
geneclustRplot
Enables the plotting of gene clusters/neighborhoods in R