Tru Huynh's repositories
RFdiffusion
Code for running RFdiffusion
pyclesperanto_prototype
GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data
CEBRA
Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA
Cell_ACDC
A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data
cellpose
a generalist algorithm for cellular segmentation
ColabFold
Making Protein folding accessible to all via Google Colab!
DD_protocol
Official repository for the Deep Docking protocol
deepEMhancer
Deep learning for cryo-EM maps post-processing
DiffDock
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
lts-2204-darlinghq
building darlinghq.org ubuntu LTS 22.04
MEDIAR
(NeurIPS 2022 CellSeg Challenge - 1st Winner) Open source code for "MEDIAR: Harmony of Data-Centric and Model-Centric for Multi-Modality Microscopy"
omnipose
Omnipose: a high-precision solution for morphology-independent cell segmentation
singularity-docker-rl8-ci
building a RockyLinux8 singularity and docker image for CI
singularity-docker-rl8-ci-builder
building a RockyLinux8 singularity(apptainer) builder
singularity-docker-rl9-ci
building a RockyLinux9 singularity and docker image for CI
stardist
StarDist - Object Detection with Star-convex Shapes
ThermoMPNN
GNN trained to predict changes in thermodynamic stability for protein point mutants