tpoterba

cloud-tools

Scripts for working with Google Cloud Dataproc service

de_novo_scripts

Script used to identify de novo variants from sequencing data.

dev-environment

gnomad_methods

Hail helper functions for gnomAD/MacArthur lab

gnomad_qc

hail

Hail, a framework for scalable genetic data analysis

learning

Repository of miscellaneous bits of code.

mouse-PHP.eB-simulation

PennCNV

Copy number vaiation detection from SNP arrays

pysql

A rudimentary SQL backend implementation for Hail Team interviewing

scorecard

spark

Mirror of Apache Spark

sphinx-autodoc-typehints

Type hints support for the Sphinx autodoc extension

terra-docker

UgerScripts

A couple of scripts to replace the horrid default qstat / qconf functionalities

vaex

Out-of-Core DataFrames for Python, visualize and explore big tabular data at a billion rows per second.

zulip-bots