Tobias Pietzsch's repositories
appose-java
Java implementation of Appose
BigStitcher
ImgLib2/BDV implementation of Stitching for large datasets
BigStitcher-Spark
Running compute-intense parts of BigStitcher distributed
git
Git Source Code Mirror - This is a publish-only repository and all pull requests are ignored. Please follow Documentation/SubmittingPatches procedure for any of your improvements.
jitk-tps
A java port of the ITK thin plate spline implementation.
keyconfig-examples
WIP blog post
knip
KNIME Image Processing Extension
list-of-update-sites
The update sites ImageJ knows about automatically
MoltenVK
MoltenVK is a Vulkan Portability implementation. It layers a subset of the high-performance, industry-standard Vulkan graphics and compute API over Apple's Metal graphics framework, enabling Vulkan applications to run on iOS and macOS.
multiview-reconstruction
Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data
n5
Not HDF5
n5-google-cloud
N5 library implementation using Google Cloud Storage backend.
n5-hdf5
Best effort N5 implementation on HDF5 files (despite the irony).
n5-viewer
BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.
stage0
A set of minimal dependency bootstrap binaries
TrackMate
TrackMate is your buddy for your everyday tracking.
TrackMate-Skeleton
TrackMate module for skeletonization of tissue end points and tracking
z-spacing
Estimate the correct positions of sections of three dimensional image data.