genome-binning
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meierdv / avdat_metagenome
This repository contains scripts used to process the metagenomic and 16S rRNA gene amplicon data obtained from biological soil crusts in at the Avdat site in the Negev Desert, Israel. The results and discussion of the analysis are published in the manuscript "Distribution of mixotrophy and desiccation survival mechanisms across microbial genomes in an arid biological soil crust community" by Dimitri Meier, Stefanie Imminger, Osnat Gillor and Dagmar Woebken. The detailed rationale behind the metagenome analysis steps is explained in "Metagenome_analysis.pdf" in this repository and in the Supplementary Methods section of the manuscript.
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