augustus

There are 1 repository under augustus topic.

• juliawiggeshoff / AugusMake

  The AugusMake pipeline is a Snakemake-based workflow for generating gene annotations using the Augustus software. AugusMake can perform gene predictions using any combination of the three methods: ab initio, with extrinsic hints, or by training a new species.

  augustusgene-predictionreproducibilityrna-seqsnakemaketranscriptome-assemblyworkflow
  Language:Python 2

• schellt / busco2snap

  Create a SNAP model from BUSCO output

  buscosnapaugustusgene-prediction
  Language:Perl 2

• llrs / Comparer

  The current code I developed to compare the examples programs

  glimmerprodigaleasygenegenemarkaugustus
  Language:Python

• purefunctor / stepped-augustus

  A variation of the Augustus Cipher that offsets space-separated words based on the position of each character.

  augustuscipherpythonpython37python38pypi-package
  Language:Python