Tom Chartrand's repositories
translators
Zotero Translators
abc_atlas_access
Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas
aisynphys
Analysis tools specific to the aiephys multipatch project.
argschema
This python module simplifies the development of modules that would like to define and check a particular set of input parameters, but be able to flexibly define those inputs in different ways in different contexts.
BluePyOpt
Blue Brain Python Optimisation Library
bmtk
Brain Modeling Toolkit
codeocean_dotfiles
dotfiles for use on Code Ocean machines, managed by chezmoi
eFEL
Electrophys Feature Extraction Library
nest-olivemodule
Module for inferior olive modeling in NEST Simulator
nest-simulator
The NEST simulator
neuroanalysis
Modular analysis tools for neurophysiology data
capsule-as-package-demo
demo of a Code Ocean capsule that can be imported directly as a package
neuron_morphology
Tools for working with single-neuron morphological reconstructions
nrn
NEURON Simulator. (iv required for the GUI)
sonata
Collaboration between BBP and AIBS
SWDB_2019
Repository for course materials for the Summer Workshop on the Dynamic Brain 2019
SWDB_2019-1
Repository for course materials for the Summer Workshop on the Dynamic Brain 2019
sweep_qc_tool
manual quality control for intracellular electrophysiology experiments
thalamus-merfish-analysis
Code Ocean capsule for sharing analysis of thalamus MERFISH data
TReND-CaMinA
TReND school in Comp Neuro and ML
x-to-nwb
Convert various patch-clamp data formats to NWBv2