Tomas Knapen's repositories
nsd_access
python package to access the data of the NSD (natural scenes dataset) fMRI project
FIRDeconvolution
Python class that performs finite impulse response fitting on time series data.
brainimaging_VU
Repository for the brainimaging course for AI and psychology master's students at the Vrije Universiteit Amsterdam
tknapen.github.io
tknapen's website
fmriprep
fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.
HCP_Connective_Fields
Repo containing code to reproduce figures for HCP CF article.
prf_fitting_workshop
Notebook repo for a little population receptive field workshop using Popeye
attention_size
Repo for the attention size experiment
python_workshop-Basel
The repository for the Nov 1-2 python workshop in Basel
braincoder
Encoding models for fMRI implemented in tensorflow
ci_for_science
Continuous Integration and Continuous developement for scientific applications
cili
cili - bring your eye tracking data into focus
fmri-caveats
Learning fMRI by Caveats
gitignore
A collection of useful .gitignore templates
hrf_mapper
hrs mapping experiment using exptools2
lyon_meg_prf
pRF mapping repository
neurodocker
Generate custom Docker and Singularity images, and minimize existing containers.
NMCP_AI_2020
Course GitHub repo for Neural Models of Cognitive Processes for AI students, 2020 edition
pymc3
Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano
pymp2rage
Lightweight Python package to process MP2RAGE and ME-MP2RAGE-data
retinotopy_review
Code and notebooks for retinotopy review
scholar_AMBition
getting Google scholar / Citation data for Ambition