Tristan Kuehn's repositories
afids-data
curated anatomical landmarks placements for common neuroimaging datasets
afids-data-datalad
All proposed AFIDs-Data DataLad datasets
afids-groundtruth-hcp
AFIDs ground truth data for HCP subset
afids-groundtruth-snsx
AFID placements for the SNSX datasets
afids-hcp-separate
AFIDs-HCP data organized as two separate datasets
afids-validator
Validator for the anatomical fiducial placement protocol
afids-regRF
automatic localization of anatomical landmarks using random forest regression
afids-snsx
AFIDs and Images for the SNSX dataset
afids-snsx-separate
Separate images and AFID placements for SNSX
bids-hcp
BIDS-ified HCP subset
bids-snsx
BIDS-formatted SNSX images
cfmm2tar
Tools for dicom-server retrieval, tarballing and conversion to bids
conp-dataset
:open_file_folder: A DataLad dataset for CONP
conp-dats-editor
This holds the code for the DATS editor GUI linked in the portal
conp-portal
:bar_chart: The CONP data portal
denoise-fmri
Snakemake BIDS app for denoising fmriprep, uses the snakebids package for running snakemake workflow as bids app
example-snakebids
Minimalist snakemake+snakemake BIDS App
labelmerge-standalone
Standalone labelmerge python script
snakebids
Snakemake + BIDS