Jay A. Tischfield Lab's repositories
dlc2labelstudio
A package to automate importing a DeepLabCut (DLC) dataset into Label Studio (LS) and exporting Label Studio annotation results back into DeepLabCut formats.
moseq2-nlp
Interrogating Moseq data using a NLP-based approach
SynapseTools
Basic tools to interface with Tucker-Davis Technologies Synapse software
Joint_kinematics
Pipeline to calculate hindlimb joint kinematics and forelimb/hindlimb coordination generated by Nofar Ozeri-Engelhard.
Language:MATLABBSD-3-Clause000
moseq-reports
Interactive interrogation of Moseq models
Parsing-RepeatMasker-Outputs
Few scripts facilitating the extraction of info from Repeat Masker .out files
paws-tools
A collection of tools for working with PAWS
Language:PythonBSD-3-Clause000
pyhsmm-autoregressive
autoregressive plugin
RapID-cell-counter
PyQT graphical interface for high throuput cell counting for research
Language:Jupyter NotebookGPL-3.0000
Language:Jupyter NotebookBSD-3-Clause000