timzuntar / PhoreMic

A simple fluorescence microscopy simulation and visualization tool

timzuntar/PhoreMic Issues

Allow for wavelength-dependent detector quantum efficiency
Updated a year ago
Provisions for 2D/possibly 3D images of variable density areas
Updated 3 years ago
Begin GUI development
Updated 3 years ago1
On-the-fly definition of simple filter spectra
Closed 3 years ago
Define classes for clarity
Updated 3 years ago
1st performance pass
Closed a year ago2
Add test cases
Updated 3 years ago
Bring single plots up to par with comparison plots
Closed 3 years ago
Implement rejection sampler for arbitrary spectral profile
Closed 3 years ago1
Merge interdependent functions into routines
Closed 3 years ago
Calculation of FWHM of point/image
Closed 3 years ago
Improvements to readme
Updated 3 years ago
Handling of 3D fluorophore fields
Closed 3 years ago2
Absorption/emission profiles for more fluorophores
Updated 3 years ago
Handle relaxation rates separately
Closed 3 years ago
Check return values of intensity normalization function
Closed 3 years ago1
Issue with approximation of STED intensity profile
Closed 3 years ago
Fix calculation of cross-section for stimulated emission
Updated 3 years ago
Lacking information in plots
Closed 3 years ago