Tim Howes (timhowes)

timhowes

Geek Repo

Company:@ParkerICI

Location:Oakland, CA

Home Page:https://timhowes.org

Twitter:@biotim

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Tim Howes's starred repositories

dagster

An orchestration platform for the development, production, and observation of data assets.

Language:PythonLicense:Apache-2.0Stargazers:10468Issues:116Issues:6983

ML-Papers-of-the-Week

🔥Highlighting the top ML papers every week.

mamba

The Fast Cross-Platform Package Manager

Language:C++License:BSD-3-ClauseStargazers:6396Issues:47Issues:1644

axolotl

Go ahead and axolotl questions

Language:PythonLicense:Apache-2.0Stargazers:6386Issues:48Issues:577

emacs-application-framework

EAF, an extensible framework that revolutionizes the graphical capabilities of Emacs

Language:PythonLicense:GPL-3.0Stargazers:2977Issues:62Issues:481

arviz

Exploratory analysis of Bayesian models with Python

Language:PythonLicense:Apache-2.0Stargazers:1538Issues:47Issues:844

LLaVA-Med

Large Language-and-Vision Assistant for Biomedicine, built towards multimodal GPT-4 level capabilities.

Language:PythonLicense:NOASSERTIONStargazers:1203Issues:25Issues:69

bambi

BAyesian Model-Building Interface (Bambi) in Python.

Language:PythonLicense:MITStargazers:1027Issues:31Issues:395

model-zoo

Please do not feed the models

Language:JuliaLicense:NOASSERTIONStargazers:889Issues:47Issues:152

targets

Function-oriented Make-like declarative workflows for R

Language:RLicense:NOASSERTIONStargazers:879Issues:18Issues:501

ggeffects

Estimated Marginal Means and Marginal Effects from Regression Models for ggplot2

Language:RLicense:NOASSERTIONStargazers:522Issues:10Issues:352

harmony

Fast, sensitive and accurate integration of single-cell data with Harmony

Language:RLicense:NOASSERTIONStargazers:497Issues:27Issues:214

Tidier.jl

Meta-package for data analysis in Julia, modeled after the R tidyverse.

Language:JuliaLicense:MITStargazers:495Issues:12Issues:59

envrc

Emacs support for direnv which operates buffer-locally

emacs-direnv

direnv integration for emacs

Language:Emacs LispLicense:BSD-3-ClauseStargazers:323Issues:8Issues:50

Giotto

Spatial omics analysis toolbox

Language:RLicense:NOASSERTIONStargazers:233Issues:13Issues:249

TuringTutorials

Documentation and tutorials for the Turing language

Language:JuliaLicense:MITStargazers:224Issues:10Issues:86

vscode-r

A Tutorial for Setting R Development Environment with VScode, Dev Containers, and Docker

epoxy

Extra-strength glue engines for R Markdown, Quarto, and Shiny

Language:RLicense:NOASSERTIONStargazers:208Issues:4Issues:62

CausalInference.jl

Causal inference, graphical models and structure learning in Julia

Language:JuliaLicense:NOASSERTIONStargazers:183Issues:10Issues:33

BPCells

Scaling Single Cell Analysis to Millions of Cells

Language:CLicense:NOASSERTIONStargazers:129Issues:4Issues:75

jupyter-rsession-proxy

Jupyter extensions for running an RStudio rsession proxy

Language:PythonLicense:BSD-3-ClauseStargazers:114Issues:13Issues:82

mcmc_diagnostics

Markov chain Monte Carlo general, and Hamiltonian Monte Carlo specific, diagnostics for Stan

Language:HTMLLicense:BSD-3-ClauseStargazers:58Issues:8Issues:2

stan-survival-model-workshop

Building a Survival Model in Stan.

Language:RLicense:BSD-3-ClauseStargazers:56Issues:4Issues:0

flexsurv

The flexsurv R package for flexible parametric survival and multi-state modelling

Pipelines.jl

A lightweight and powerful Julia package for computational pipelines and workflows.

Language:JuliaLicense:MITStargazers:43Issues:3Issues:13

bayesian

Bindings for Bayesian TidyModels

Language:RLicense:NOASSERTIONStargazers:43Issues:5Issues:16

julia-deeplearning

A course repository to follow along fast.ai using Julia!

Language:HTMLLicense:MITStargazers:34Issues:8Issues:1

physalia-forecasting-course

Ecological forecasting using Dynamic Generalized Additive Models with R 📦's {mvgam} and {brms}

IntegratedLearner

Integrated Machine Learning for Multi-omics Classification and Prediction

Language:HTMLLicense:MITStargazers:11Issues:6Issues:6