Tim Holy's repositories
ProgressMeter.jl
Progress meter for long-running computations
ProfileView.jl
Visualization of Julia profiling data
SnoopCompile.jl
Making packages work faster with more extensive precompilation
CodeTracking.jl
It's editing-time, do you know where your methods are?
MethodAnalysis.jl
Utilities to analyze Julia's method tables
FlameGraphs.jl
Analysis of profiling data using trees
PkgCacheInspector.jl
Inspect the contents of Julia package cache files
AggregateBy.jl
Aggregate collections by keys
AxisAlgorithms.jl
Efficient filtering and linear algebra routines for multidimensional arrays
ThickNumbers.jl
Abstract type and utility functions for numbers that also act like sets/intervals
AssignGroups.jl
Assign students to collaborative groups
CovarianceEstimation.jl
Lightweight robust covariance estimation in Julia
ImagineFormat.jl
Read .imagine files in Julia
MolecularGraph.jl
Graph-based molecule modeling toolkit for cheminformatics
AbstractDifferentiation.jl
An abstract interface for automatic differentiation.
BioAlignments.jl
Sequence alignment tools
BioStructures.jl
A Julia package to read, write and manipulate macromolecular structures (particularly proteins)
Distributions.jl
A Julia package for probability distributions and associated functions.
ExpectationMaximization.jl
A simple but generic implementation of Expectation Maximization algorithms to fit mixture models.
LineSearches.jl
Line search methods for optimization and root-finding
NLPModels.jl
Data Structures for Optimization Models
PDMats.jl
Uniform Interface for positive definite matrices of various structures
ProtPlot.jl
Protein ribbon plots implemented in Julia using GLMakie
ZernikePolynomials.jl
A package to work with Zernike Polynomials in the Julia programming language.