tigerdavid / Radiomics_System

Radiomics System

Introduction

This is a radiomics-computing system which supports 3D medical image visualization, annotation, feature extraction and analysis. Video demo and figures can be found on the website.

Environment

This package is based on Python 3.6, and uses external packages like PyQt5, to reproduce the environment on your computer, please do:

conda env create -f environment.yml

If you do not need to use the CUDA-based feature extraction method, then either Win10 and Ubuntu 16.04 can work well for you.

However,if you hope to use the CUDA-based feature extraction method, you must make sure you are using Ubuntu and you can compile the cuRadiomics codes correctly.

How to use

After setting up the environment, please first activate the environment and then run the app.

conda activate bs
python app.py

A GUI interface would appear:

Here is a demo on how to use the package. You can find more on the website.