Tianyu Lu's repositories
protein-design-scripts
Scripts for MD, RosettaDesign, Free Energy Calculations
protein-design
Python tools for protein design
assignment_0
Assignment 0
bio_embeddings
Get protein embeddings from protein sequences
ColabDesign
Making Protein Design accessible to all via Google Colab!
graphein
Protein Graph Library
heterognn
CS224W Project
hgraph2graph
Hierarchical Generation of Molecular Graphs using Structural Motifs
intro-tutorial
Introduction to tools
latent_ode
Code for "Latent ODEs for Irregularly-Sampled Time Series" paper
structure-generation
Code for protein structure generative modelling
tianyu-lu.github.io
A lightweight, customizable single-page personal portfolio website template built with JavaScript and Sass
torchmd-autodiff
An example to demonstrate autograd in torchmd.
torchsde
Differentiable SDE solvers with GPU support and efficient sensitivity analysis.
vq-vae-2-pytorch
Implementation of Generating Diverse High-Fidelity Images with VQ-VAE-2 in PyTorch